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De Bruijn Graph

Creator: Petar Veličković (original)

A de Bruijn graph for genome assembly links k-mer prefixes and suffixes as nodes with reads as edges; the dashed red Eulerian tour visits every edge once to reconstruct the sequence.


De Bruijn Graph

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PNGPDFSVG

  Code

  de-bruijn-graph.typ (91 lines)

  de-bruijn-graph.tex (32 lines)